6.500

(excluding 19% VAT)

Functional Spheroids: Microcavity Arrays, Oxygen Profiling & 3D Mitochondrial Stress Testing

Course Details

Course Details

  XTech Academy in collaboration with CAVIGEN
  • Location: XTech Academy, BioLabs, Heidelberg, Germany
  • Duration: 6 days
  • Format: Hybrid (2 Online Theory Days + 4 In-Person Laboratory Days)
  • Level: Intermediate (designed for MSc/PhD students, postdocs, and professionals working in cell biology, oncology, or regenerative medicine)

 

Workshop Schedule:

 

  • 2–3 July 2026 (Online) | 6–10 July 2026 (In Person)
  • 5–6 November 2026 (Online) | 9–13 November 2026 (In Person)

Workshop Schedule:

Additional information

Overview

Advance your expertise in 3D cell culture with this comprehensive hybrid workshop focusing on reproducible spheroid generation, real-time oxygen monitoring, hypoxia profiling, and functional mitochondrial analysis.

This intensive training program combines two online theory days with four days of hands-on laboratory training, providing participants with a complete workflow from spheroid generation to advanced functional characterization. Using MicroSpheres™, SensoSpheres™, MicrosCube™ oxygen sensing technology, fluorescence microscopy, confocal imaging, and mitochondrial stress testing, participants will gain practical experience with cutting-edge tools increasingly used in pharmaceutical research, cancer biology, toxicology, tissue engineering, and organ-on-chip development.

Unlike conventional 3D culture courses that focus primarily on morphology, this workshop emphasizes the functional biology of spheroids. Participants will learn how oxygen availability shapes cellular behavior, how mitochondrial function can be measured in three-dimensional tissues, and how physiological parameters can be integrated with imaging data to generate biologically meaningful insights.

Throughout the course, participants will design experiments, generate spheroids, perform staining procedures, collect real-time oxygen measurements, conduct mitochondrial stress tests, analyze their own datasets, and discuss how these technologies can be implemented in their own research projects.

Prerequisites

This advanced course is recommended for participants who have:

  • Prior experience with mammalian cell culture
  • Basic understanding of 3D cell culture systems
  • Experience with fluorescence microscopy is beneficial
  • Completion of an introductory 3D Cell Culture course or equivalent experience

Learning Objectives

By the end of this workshop participants will be able to:

  • Generate reproducible spheroids using MicroSphere and SensoSphere platforms
  • Understand the principles of oxygen sensing in 3D cultures
  • Perform live/dead and mitochondrial staining protocols
  • Operate fluorescence and confocal microscopes for spheroid analysis
  • Monitor oxygen dynamics under normoxic, hypoxic and hyperoxic conditions
  • Design and execute 3D mitochondrial stress tests
  • Analyze oxygen consumption profiles and mitochondrial responses
  • Integrate imaging, oxygen sensing and functional assay data
  • Apply these workflows to drug screening, disease modelling and organ-on-chip systems

Online Theory Sessions

Day 1 (Online)

3D Cell Culture Foundations

Time Activity
9:00 – 9:15 Introduction & Course Overview
9:15 – 9:45 From 2D Monolayers to 3D Cell Culture
9:45 – 10:30 MicroSpheres: Principles & Experimental Design
10:30 – 10:45 Coffee Break
10:45 – 11:15 Staining Techniques in 3D: Live/Dead and Mitochondrial Probes
11:15 – 11:45 Microscopy & Imaging: Principles and Tips
11:45 – 12:15 LDH Assay as a Functional Readout in Spheroid Cultures
12:15 – 12:30 Q&A Session

Day 2 (Online)

Oxygen in Cell Culture

Time Activity
9:00 – 9:15 Welcome & Questions
9:15 – 9:45 Oxygen in 3D Cell Culture: From Hypoxia to Physioxia
9:45 – 10:30 Principles of Oxygen Sensing
10:30 – 10:45 Coffee Break
10:45 – 11:15 Experimental Design for Oxygen Measurement & 3D Mito-Stress Testing
11:15 – 11:45 Basic Data Interpretation
11:45 – 12:15 Overview of Practical Work & Hands-On Plan
12:15 – 12:30 Wrap-Up & Next Steps

Hands-On Laboratory Training

Day 3 (In-Person)

Spheroid Generation & Oxygen Monitoring

Time Activity
8:00 – 8:30 Welcome, Lab Planning & Questions
8:30 – 9:30 Introduction to BSL-2 Guidelines
9:30 – 10:30 Preparation of MicroSpheres & SensoSpheres; 2D Cell Harvesting and Single-Cell Suspension Preparation
10:30 – 10:45 Coffee Break
10:45 – 12:30 Completion of Cell Preparation and Parallel Seeding
12:30 – 13:30 Lunch Break
13:30 – 14:15 Calibration of MicrosCube Systems & Start of 72-Hour Oxygen Monitoring
14:15 – 15:00 Introduction to Fluorescence & Confocal Microscopy
15:00 – 15:15 Coffee Break
15:15 – 16:00 Open Lab & Questions
16:00 – 16:30 Daily Wrap-Up & Planning

Day 4 (In-Person)

Imaging, Staining & Early Oxygen Analysis

Time Activity
9:00 – 9:15 Short Recap
9:15 – 9:30 First Review of Oxygen Curves
9:30 – 10:00 Live/Dead Staining of Trainer-Prepared MicroSphere Spheroids
10:00 – 10:15 Coffee Break
10:15 – 12:15 Fluorescence & Confocal Imaging
12:15 – 13:15 Lunch Break
13:15 – 14:15 Brightfield Imaging of Participants’ Own MicroSpheres
14:15 – 14:45 Adjustment of Hypoxia/Hyperoxia Conditions
14:45 – 15:00 Coffee Break
15:00 – 15:45 Optional Imaging or Image Analysis Session
15:45 – 16:15 Q&A, Observations & Planning

Day 5 (In-Person)

Hypoxia Profiling & Mito-Stress Experimental Design

Time Activity
9:00 – 9:15 Recap & Planning
9:15 – 10:00 Imaging of Participants’ Own MicroSpheres
10:00 – 11:15 Hypoxia Staining: Fixation & Primary Antibody Incubation
11:15 – 11:30 Coffee Break
11:30 – 12:30 Optional Imaging or MitoTracker Staining
12:30 – 13:30 Lunch Break
13:30 – 14:00 Intermediate Oxygen Curve Analysis
14:00 – 14:45 Theory Session: 3D Mito-Stress Test
14:45 – 15:00 Coffee Break
15:00 – 15:30 Design of Mito-Stress Experiments
15:30 – 16:15 Future Outlook: Organoids & Organ-on-Chip Technologies

Day 6 (In-Person)

3D Mitochondrial Stress Testing

Time Activity
9:00 – 9:15 Recap & Planning
9:15 – 9:30 Preparation of First Mito-Stress Test
9:30 – 12:00 Control 3D Mito-Stress Test
9:45 – 11:45 Parallel Hypoxia Staining: Secondary Antibody Incubation
12:00 – 13:00 Lunch Break
13:00 – 13:30 Preparation of Second Mito-Stress Test
13:30 – 16:00 Substance/Inhibitor-Based 3D Mito-Stress Test
13:45 – 15:45 Parallel Fluorescence & Confocal Imaging of Hypoxia-Stained Samples
16:00 – 16:30 Joint Discussion & Preliminary Data Review

What Participants Will Gain

  • Reproducible spheroid generation using advanced microcavity systems
  • Live/dead and mitochondrial staining techniques
  • Fluorescence and confocal microscopy skills
  • Real-time oxygen monitoring and analysis
  • Understanding of hypoxia, normoxia and physioxia in 3D cultures
  • Functional mitochondrial stress testing workflows
  • Advanced data analysis and interpretation strategies
  • Practical experience with technologies used in modern drug development
  • Insights into organoid and organ-on-chip applications

Course Format

Format: Hybrid (2 Online Theory Days + 4 In-Person Laboratory Days)

Location: Heidelberg, Germany

Class Size: 4–6 Participants

Training Style: Intensive Hands-On Workshop

Certificate: XTech Academy Certificate of Completion

Recommended Background: Prior experience in mammalian cell culture and basic 3D spheroid culture systems.

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